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Original Article

Genetically-modified, redirected T cells target hepatitis B surface antigen-positive hepatocytes and hepatocellular carcinoma lesions in a clinical setting

Clinical and Molecular Hepatology 2024;30(4):735-755.
Published online: May 29, 2024

1Department of Liver Surgery, Peking Union Medical College Hospital, PUMC, and Chinese Academy of Medical Sciences, Beijing, P. R. China

2SCG Cell Therapy Pte. Ltd., Singapore, Singapore

3Institute of Virology, School of Medicine, Technical University of Munich/Helmholtz Munich, Munich, Germany

Corresponding author : Shunda Du Department of Liver Surgery, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, 1 Shuaifuyuan, Wangfujing, Beijing 100730, P. R. China Tel: +86-10-69152836, Fax: +86-10-69156043, E-mail: dushd@pumch.cn
Ulrike Protzer Institute of Virology, Technical University of Munich/Helmholtz Munich, Trogerstrasse 30, 81675 Munich, Germany Tel: +49-89-4140-6821, Fax: +49-89-4140-6823, E-mail: protzer@tum.de

Editor: Su Hyung Park, Korea Advanced Institute of Science and Technology (KAIST), Korea

• Received: January 20, 2024   • Revised: May 28, 2024   • Accepted: May 28, 2024

Copyright © 2024 by The Korean Association for the Study of the Liver

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Citations

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Genetically-modified, redirected T cells target hepatitis B surface antigen-positive hepatocytes and hepatocellular carcinoma lesions in a clinical setting
Clin Mol Hepatol. 2024;30(4):735-755.   Published online May 29, 2024
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Genetically-modified, redirected T cells target hepatitis B surface antigen-positive hepatocytes and hepatocellular carcinoma lesions in a clinical setting
Clin Mol Hepatol. 2024;30(4):735-755.   Published online May 29, 2024
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Genetically-modified, redirected T cells target hepatitis B surface antigen-positive hepatocytes and hepatocellular carcinoma lesions in a clinical setting
Image Image Image Image Image Image Image Image
Figure 1. Properties of the clinical HBV-specific T cell product SCG101. (A) Schematic structure of the HLA-A*02-restricted, HBV S20-specific T cell receptor (TCR) used for transduction of T cells to generate SCG101. To increase TCR expression and correct pairing, TCR chains were codon-optimized, and an additional cysteine bond (orange, dashed line) was introduced to the constant domains. The human constants harbored nine amino acids from the murine TCR constant domains as indicated (red lines). pMHC, complex of peptide and MHC. (B) Binding strengths of TCR SCG101 expressed in Jurkat cells. Jurkat-SCG101 were stained with decreasing amounts of HLA-A*02:01-S20 (FLLTRILTI)-PE-labeled multimers (blue circles) or with an HLA-A*02:01-C18 (FLPSDFFPSV) multimer (red circles) as negative control. The mean fluorescence intensity (MFI) was quantified by flow cytometry. (C) TCR expression in CD8+ and CD4+ T cells after lentiviral transduction was detected by co-staining S20 dextramer and anti-human CD4/CD8. The binding of a PE-labeled S20-multimer indicates correctly paired TCR chains and Vβ5.1-FITC staining indicates the proportion of transduced T cells. Quantification of the potential TCR mispairing rate in % as a quotient of total S20 dextramer+ cells divided by (total Vβ5.1+ cells – endogenously expressing Vβ5.1+ cells). Mean±SEM for mispairing rates of six SCG101 batches are shown. Untransduced cells (UT) served as a control to quantify T cells endogenously expressing Vβ5.1. (D) Estimation of the SCG101 recognition motif by alanine scanning. Each native residue of peptide S20 (FLLTRILTI) was substituted at each position for an alanine. T2 cells were pulsed with 1 µM of each modified peptide indicated on the x-axis and co-cultured with SCG101 TCR-T, the IFN-γ concentration was measured by CBA. The prototype S20-gtA/D and the C18 peptide were set as positive or negative controls, respectively. (E) Cross-reactivity screening of SCG101 against human peptides containing the core binding motif L3 / T4 / R5 / I6 at concentrations of 1 (blue circles) and 0.1 (red circles) µg/mL. (F) Cross-reactivity of SCG101 against human peptides containing ≥ six amino acid sites consistent with the S20 peptide. S20-B/C peptide FLLTKILTI represents a variant often found in HBV genotypes B and C. Mean values of duplicates are shown. The labeling indicates the name of the human gene containing the respective peptide sequence. HBV, hepatitis B virus; HLA, human leukocyte antigen; SEM, standard error of the mean; IFN-γ, interferon-gamma; CBA, cytometric bead array.
Figure 2. In vitro potency of the HBV-specific T-cell product SCG101. (A) The functional avidity of SCG101 T cells was assessed by titration of the S20 peptide (blue circles) loaded on T2 cells. The concentration of IFN-γ, TNF-α, and IL-2 in supernatants after 24 hours of coculture was measured by CBA. C18 peptide (red circles) loading served as a negative control. (B) Cytolysis of tumor cell lines determined by the impedance of adherent target cells via xCELLigence real-time measurement. HBsAg negative (left) or positive (right) HepG2 target cells were co-cultured with SCG101 (blue lines) or untransduced (UT, red lines) at an effector-to-target (E:T) ratio of 1:1 (solid lines) or 1:5 (dashed lines). Mean values are shown. (C) Supernatants of the co-cultures were analyzed for IFN-γ after 48 hours by CBA. (D) HBsAg in supernatants after 48 hours of co-culture was measured by a quantitative ELISA. Data from two donors (C, D mean±SEM) are shown. HBV, hepatitis B virus; IFN-γ, interferon-gamma; TNF-α, tumor necrosis factor-α; IL, interleukin; HBsAg, hepatitis B surface antigen; SEM, standard error of the mean; CBA, cytometric bead array.
Figure 3. In vivo anti-tumor potency of HBV-specific SCG101 T cells. (A) NOD-Cg-PrkdcSCIDIL-2Rgcnull/vst (NPG) mice (female:male=1:1) were subcutaneously inoculated with 1×107 HBsAg+ hepatoma cells/animal in the right armpit. After six days, 60 animals were divided into six groups. Mice received either increasing numbers of SCG101, multimer positive T cells of 0.2 to 2×107 TCR-T cells/animal, or a mixture of CS10, HSA, and sodium chloride (vehicle, black lines), or untransduced T cells (UT, 4.3×107 cells/animal, brown lines) according to the total number of T cells in the highest SCG101 group. Injections were done intravenously and (B) body weight and (C) tumor volume were analyzed twice weekly. Mean±SEM of n=10 per group, 5 males (circles) and 5 females (squares) are shown. HBV, hepatitis B virus; HBsAg, hepatitis B surface antigen; TCR-T, T cell receptor T cells; SEM, standard error of the mean. ***P≤0.001.
Figure 4. Patient characteristics. (A) Scheme of the medical history of HCC diagnosis and treatment of patient ST1206. Study enrollment was initiated after the failure of three prior HCC treatments (resection, transarterial chemoembolization [TACE] with Raltitrexed and Lobaplatin, and Sorafenib). (B) HLA profile and status of liver disease of patient ST1206 including Child-Pugh-Score, Eastern Co-operative Oncology Group (ECOG) performance status, Barcelona Clinic Liver Cancer (BCLC) staging, and China liver cancer (CNLC) classification. Blue lines indicate duration of systemic treatments. ETV=Entecavir. (C–F) Immunohistological analysis of a liver biopsy taken three months prior to treatment. Four pieces of non-tumor liver tissue were obtained, and representative sections are shown. Scale bars: 200 µm and 40 µm (inlay), respectively. The circle indicates the orientation of the inlay. (C) Morphological analysis using hematoxylin and eosin (H&E) staining. Immunostainings for (D) HLA-A, (E) HBcAg, and (F) HBsAg (three different sections are shown because of a diverse expression profile). HCC, hepatocellular carcinoma; HLA, human leukocyte antigen; HBcAg, hepatitis B core antigen; HBsAg, hepatitis B surface antigen.
Figure 5. Liver and cytokine serum markers after transfer of HBV-specific SCG101 T cells. (A) Scheme of the drug administration (black circles) and tumor assessments (white circles). Following Cy/Flu lymphodepletion on days -6 to -4, a single dose of 7.9×107/kg (5.9×109 total) TCR-T cells was infused intravenously. Red lines indicate blood sample collections. (B–H) Serum markers of liver function, alanine transaminase (ALT), aspartate transaminase (AST), lactate dehydrogenase (LDH), TBIL (total bilirubin), ferritin, albumin, and the INR were measured on indicated days. A grey area indicates the normal range. (I) C-reactive protein (CRP) indicating ongoing inflammation. (J–M) Serum concentrations of IL-6, IFN-γ, IL-2, and IL-10 were determined by CBA. HBV, hepatitis B virus; Cy/Flu, cyclophosphamide plus fludarabine; TCR-T, T cell receptor T cells; LDH, lactate dehydrogenase; INR, international normalized ratio; IL, interleukin; IFN-γ, interferon-gamma; CBA, cytometric bead array; LOD, limit of detection; LD, lymphodepletion; ACT, adoptive cell transfer.
Figure 6. Ex vivo analysis of transferred T cells. (A) Flow cytometry gating strategy exemplified with a blood sample taken 21 days posttransfer. Single living lymphocytes were gated first, followed by identification of transferred cells via anti-CD3 and HBV S20-dextramer staining. In two separate staining panels, dextramer-binding TCR+ T cells were stained either for the T cell subsets with anti-CD8 and anti-CD4, or for memory differentiation status with anti-CCR7 and anti-CD45RA. Given the unspecific stimulation during T cell transduction and the antigen encounter after infusion, CCR7+ CD45RA+ cells were considered TSCM and not naïve cells. The FMO (fluorescence minus one) control shows a staining without dextramer. (B, C) Flow cytometry analysis of blood samples taken after the cell transfer, gated on CD3+ and HBV-S20-dextramer+ cells (blue circles). TCR+ T cells stained either for the T-cell subsets with anti-CD8 (pink triangle) or antiCD4 (purple triangle), or for memory differentiation status with anti-CCR7 and anti-CD45RA. TCM :CCR7+CD45RA- (red squares), TSCM :CCR7+CD45RA+ (green triangle), TEM :CCR7-CD45RA- (black circles), TEFF :CCR7-CD45RA+ (orange diamond). Different T-cell phenotypes were analyzed on indicated days and quantified using counting beads. (D) Genomic DNA was extracted from blood samples and the viral copy number (VCN) was quantified via qPCR. HBV, hepatitis B virus; TCR, T cell receptor; CCR, C-C chemokine receptor; qPCR, quantitative polymerase chain reaction.
Figure 7. Antiviral and antitumor response after treatment with HBV-specific SCG101 T cells. (A) HBsAg (left axis, blue squares) was measured in serum at indicated time points. The diagnostic ELISA’s lower limit of detection (LoD) was 0.05 IU/mL. ALT values (right axis, orange line) from Figure 6B were plotted again to better visually correlate both markers. The adoptive cell transfer (ACT) time point is indicated with a dashed line. (B) HBV-DNA was measured in sera via qPCR. (C) Immunostaining of HBsAg of a liver biopsy taken 73 days after treatment. One piece of non-tumor liver tissue was obtained. Scale bars: 200 µm and 50 µm (inlay), respectively. (D) The tumor burden was analyzed via multiphasic CT scan on days -7 prior to treatment and on days 28, 63, 133, and 181 after ACT. The size of the target (T) lesion no.1 and no.2 in mRECIST (m) or iRECIST (i) and the position of non-target (NT) lesions are indicated in yellow. HBV, hepatitis B virus; HBsAg, hepatitis B surface antigen; ALT, alanine aminotransferase; qPCR, quantitative polymerase chain reaction; CT, computer-assisted tomography.
Graphical abstract
Genetically-modified, redirected T cells target hepatitis B surface antigen-positive hepatocytes and hepatocellular carcinoma lesions in a clinical setting
TRAE Highest severity Relation with SCG101 Other possible reasons ≥G3 AE duration
CRS Grade 3 Definitely related \ G3: D1-3
Hypotension Grade 3 Possibly related \ G3: D1-2
Decreased white blood cell count Grade 4 Possibly related Lymphodepletion G4: D0-4
G3: D4-5, D14-17, D21-22, D28-30, 31-34
Decreased neutrophil count Grade 4 Possibly related Lymphodepletion G4: D2-4, D28-30
G3: D0-2, 13-17, 31-34, 48-52
Decreased platelet count Grade 4 Possibly related Lymphodepletion G4: D2-3, D4-6, D21-28
G3: D0-2, D3-4, D6-11, D12-13, D14-21
Grade 3 Possibly related Hepatocellular carcinoma G3: D30-43, D77-80
Decreased lymphocyte count Grade 3 Possibly related Lymphodepletion G3: D28-31
Increased ALT Grade 4 Possibly related Lymphodepletion G4: D2-4
G3: D1-2, D4-7
Increased AST Grade 4 Possibly related Lymphodepletion G4: D2-3
G3: D1-2, D3-4
Table 1. Treatment-related adverse events ≥grade 3

All these ≥grade 3 were resolved or returned to baseline at the end of the AE.

TRAE, treatment related adverse event; G3, grade 3; G4, grade 4; CRS, cytokine release syndrome; ALT, alanine aminotransferase; AST, aspartate aminotransferase