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Original Article

No association between the IL28B SNP and response to peginterferon plus ribavirin combination treatment in Korean chronic hepatitis C patients

Clinical and Molecular Hepatology 2014;20(2):177-184.
Published online: June 30, 2014

1Department of Internal Medicine, Haeundae Paik Hospital, Inje University College of Medicine, Busan, Korea.

2Department of Gastroenterology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.

3Department of Laboratory Medicine, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.

4Department of Pharmacology and Clinical Trial Center, Busan Paik Hosptial, Inje University College of Medicine, Busan, Korea.

Corresponding author: Young-Suk Lim. Department of Gastroenterology, Asan Medical Center, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 138-736, Korea. Tel. +82-2-3010-3190, Fax. +82-2-485-5782, limys@amc.seoul.kr
• Received: May 29, 2014   • Revised: June 10, 2014   • Accepted: June 12, 2014

Copyright © 2014 by The Korean Association for the Study of the Liver

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Citations

Citations to this article as recorded by  Crossref logo
  • IL28B gene polymorphism rs12979860, but not rs8099917, contributes to the occurrence of chronic HCV infection in Uruguayan patients
    Natalia Echeverría, Daniela Chiodi, Pablo López, Adriana Sanchez Ciceron, Jenniffer Angulo, Marcelo López-Lastra, Paola Silvera, Adrian Canavesi, Carla Bianchi, Valentina Colistro, Juan Cristina, Nelia Hernandez, Pilar Moreno
    Virology Journal.2018;[Epub]     CrossRef
  • The impact of genetic variation in IL28B, IFNL4 and HLA genes on treatment responses against chronic hepatitis C virus infection
    Fatemeh Sakhaee, Morteza Ghazanfari, Farzam Vaziri, Fatemeh Rahimi Jamnani, Mehdi Davari, Safoora Gharibzadeh, Roohollah Fateh, Farid Abdolrahimi, Shahin Pourazar Dizaji, Abolfazl Fateh, Seyed Davar Siadat
    Infection, Genetics and Evolution.2017; 54: 330.     CrossRef
  • Immunological dynamics associated with rapid virological response during the early phase of type I interferon therapy in patients with chronic hepatitis C
    Jae-Won Lee, Won Kim, Eun-Kyung Kwon, Yuri Kim, Hyun Mu Shin, Dong-Hyun Kim, Chan-Ki Min, Ji-Yeob Choi, Won-Woo Lee, Myung-Sik Choi, Byeong Gwan Kim, Nam-Hyuk Cho, Eui-Cheol Shin
    PLOS ONE.2017; 12(6): e0179094.     CrossRef
  • IL28B rs12980275 variant as a predictor of sustained virologic response to pegylated-interferon and ribavirin in chronic hepatitis C patients: A systematic review and meta-analysis
    Hao Zheng, Man Li, Bing Chi, Xiao-xue Wu, Jia Wang, Dian-Wu Liu
    Clinics and Research in Hepatology and Gastroenterology.2015; 39(5): 576.     CrossRef

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No association between the IL28B SNP and response to peginterferon plus ribavirin combination treatment in Korean chronic hepatitis C patients
Clin Mol Hepatol. 2014;20(2):177-184.   Published online June 30, 2014
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No association between the IL28B SNP and response to peginterferon plus ribavirin combination treatment in Korean chronic hepatitis C patients
Clin Mol Hepatol. 2014;20(2):177-184.   Published online June 30, 2014
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No association between the IL28B SNP and response to peginterferon plus ribavirin combination treatment in Korean chronic hepatitis C patients
Image Image
Figure 1 Associations between SVR and the IL28B rs12979860, rs12980275, rs8099917, and rs8103142 genotypes. A, HCV genotype 1 group. B, HCV non-type-1 genotype group.
Figure 2 IL28B SNP linkage disequilibria (LDs). D-prime=proportion of the possible LD that was present between the SNPs. D' varies from 0 (complete equilibrium) to 1 (complete disequilibrium). r2=correlations between the SNPs. When r2=1, two SNPs are in perfect LD, and the allele frequencies are identical for each SNP. The values in the box are percentages. Empty spaces in the box indicate values of 100%.
No association between the IL28B SNP and response to peginterferon plus ribavirin combination treatment in Korean chronic hepatitis C patients
Variable
Genotype 1 All (n=76) SVR (n=54) Non-SVR (n=22) P-value
 Age (years)* 51.9 ± 8.6 51.9 ± 8.7 51.7 ± 8.5 0.928
 Male 48 (63.2%) 35 (64.8%) 13 (59.1%) 0.639
 Body weight (kg)* 67.4 ± 11.7 67.2 ± 11.5 67.9 ± 12.4 0.802
 WBC count (/mm3)* 5,299 ± 1,343 5,474 ± 1,401 4,868 ± 1,103 0.074
 Hemoglobin (g/dL)* 14.2 ± 1.5 14.3 ± 1.6 13.9 ± 1.1 0.280
 Platelet count (×103/mm3)* 162 ± 71 169 ± 74 143 ± 62 0.156
 ALT (IU/L) 77 (49-137) 83 (49-145) 67 (47-123) 0.359
 Cirrhosis 25 (32.9%) 16 (29.6%) 9 (40.9%) 0.343
 Type of interferon 0.713
  PEG-IFN α-2a 67 (88.2%) 48 (88.9%) 19 (86.4%)
  PEG-IFN α-2b 9 (11.8%) 6 (11.1%) 3 (13.6%)
 Treatment duration (week) 48 (45-48) 48 (45-48) 48 (46-51) 0.086
 HCV RNA level (log10 IU/mL)* 5.8 ± 1.0 5.7 ± 1.1 6.1 ± 0.5 0.030
Genotype non-1 All (n=80) SVR (n=71) Non-SVR (n=9) P-value
 Age (years)* 52.6 ± 10.3 52.6 ± 10.4 52.9 ± 9.5 0.976
 Male 37 (46.3%) 34 (47.9%) 3 (33.3%) 0.494
 Body weight (kg)* 63.9 ± 9.6 64.3 ± 9.9 61.0 ± 6.1 0.621
 WBC count (/mm3)* 5,351 ± 1,460 5,451 ± 1,452 4,567 ± 1,351 0.073
 Hemoglobin (g/dL)* 14.1 ± 1.4 14.2 ± 1.4 13.0 ± 1.5 0.025
 Platelet count (×103/mm3)* 178 ± 60 186 ± 57 116 ± 47 0.002
 ALT (IU/L) 59 (42-121) 59 (42-111) 128 (40-192) 0.365
 Cirrhosis 12 (15.0%) 9 (12.7%) 3 (33.3%) 0.129
 Type of interferon 0.002
  PEG-IFN α-2a 69 (86.3%) 65 (91.5%) 4 (44.4%)
  PEG-IFN α-2b 11 (13.8%) 6 (8.5%) 5 (55.6%)
 Treatment duration (week) 24 (24-24) 24 (24-24) 24 (21-28) 0.425
 HCV RNA level (log10 IU/mL)* U 5.4 ± 1.0 5.4 ± 1.0 6.1 ± 0.6 0.011
IL28B SNP Genotype Frequency (%)
rs12979860 CC CT TT
141 (90.4%) 15 (9.6%) 0
rs12980275 AA AG GG
136 (87.2%) 20 (12.8%) 0
rs8099917 TT TG GG
144 (92.3%) 12 (7.7%) 0
rs8103142 TT CT CC
141 (90.4%) 15 (9.6%) 0
IL28B SNP Genotype Frequency (%)
rs12979860 CC CT TT
25 (92.6%) 2 (7.4%) 0
rs12980275 AA AG GG
24 (88.9%) 3 (11.1%) 0
rs8099917 TT TG GG
25 (92.6%) 2 (7.4%) 0
rs8103142 TT CT CC
25 (92.6%) 2 (7.4%) 0
Univariable analysis
Multivariable analysis*
OR (95% CI) P-value OR (95% CI) P-value
Genotype 1
 Age (year) 1.00 (0.95-1.06) 0.926
 Gender (male) 0.78 (0.28-2.17) 0.639
 Body weight (kg) 0.99 (0.95-1.04) 0.799
 WBC (/mm3) 1.00 (1.00-1.00) 0.078 1.00 (1.00-1.00) 0.569
 Hb (g/dL) 1.21 (0.86-1.72) 0.277
 Platelet count (/mm3) 1.00 (1.00-1.00) 0.157 1.00 (1.00-1.00) 0.210
 Serum ALT (IU/L) 1.01 (1.00-1.01) 0.234 1.01 (1.00-1.01) 0.312
 HCV RNA (log10 IU/mL) 0.60 (0.32-1.10) 0.100 0.62 (0.33-1.17) 0.142
 Cirrhosis 0.60 (0.22-1.72) 0.345
 Type of interferon 0.81 (0.18-3.57) 0.779
 rs12979860 1.27 (0.31-5.20) 0.743
Genotype non-1
 Age (year) 1.00 (0.93-1.07) 0.925
 Gender (male) 0.54 (0.13-2.35) 0.544
 Body weight (kg) 1.04 (0.96-1.14) 0.331
 WBC (/mm3) 1.00 (1.00-1.00) 0.092 1.00 (1.00-1.00) 0.355
 Hb (g/dL) 1.81 (1.08-3.05) 0.024 2.00 (0.65-6.18) 0.229
 Platelet count (/mm3) 1.00 (1.00-1.00) 0.003 1.00 (1.00-1.00) 0.013
 Serum ALT (IU/L) 1.00 (0.99-1.00) 0.155 1.00 (0.99-1.01) 0.919
 HCV RNA (log10 IU/mL) 0.35 (0.11-1.09) 0.069 0.05 (0.00-0.77) 0.033
 Cirrhosis 0.29 (0.06-1.37) 0.118 1.98 (0.10-40.0) 0.658
 Type of interferon 0.07 (0.02-0.35) 0.001 0.40 (0.03-6.29) 0.511
 rs12979860 2.21×108 (0.00-) 0.999
Table 1. Baseline characteristics of chronic hepatitis C patients according to treatment outcome

WBC, white blood cell count; ALT, alanine aminotransferase; PEG-IFN, peginterferon; HCV RNA, hepatitis C virus ribonucleic acid; SVR, sustained virologic response.

Mean ± standard deviation.

Median (interquartile range).

The genotype non-1 group included 77, 2, and 1 patients with genotypes 2, 3, and 6, respectively.

§One of the HCV genotype non-1 patients had only a qualitative HCV RNA result in the initial dataset.

Table 2. Percentage genotype distributions of the IL28B SNPs rs12979860, rs12980275, rs8099917, and rs8103142 among patients who were treated with PEG-IFN and RBV

IL28B SNP, interleukin 28B single nucleotide polymorphism.

Table 3. Percentage genotype distributions of the IL28B SNPs rs12979860, rs12980275, rs8099917, and rs8103142 among the spontaneous HCV clearance patients

IL28B SNP, interleukin 28B single nucleotide polymorphism.

The multivariate logistic regression included the variables with P-values <0.25 in the univariate analyses.

Table 4. Predictive factor analysis for sustained virologic response in genotype 1 and non-1

SVR, sustained virologic response; WBC, white blood cell; Hb, hemoglobin; ALT, alanine aminotransferase; HCV RNA, hepatitis C virus ribonucleic acid.

The multiple logistic regression included the variables with P-values <0.25 in the univariate analyses.