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"Gut microbiome"

Original Article

Bacteroides eggerthii ameliorates metabolic dysfunction-associated steatotic liver disease through host–microbe signaling and highlights 2-hydroxyisocaproate as a potential effector
Jiyi Choi, Moon Gyeong Yoon, Se Ha Jang, Geum Ok Baek, Hyun Sun Jung, Na-Rae Lee, Choong Hwan Lee, Ji Eun Han, Jae Youn Cheong, Jung Woo Eun, Soon Sun Kim
Clin Mol Hepatol 2026;32(1):239-257.
Published online October 27, 2025
DOI: https://doi.org/10.3350/cmh.2025.0475
Background/Aims
Gut microbiome plays a pivotal role in metabolic dysfunction-associated steatotic liver disease (MASLD) pathogenesis, yet, associated functional mechanisms and host responses of specific microbial species remain insufficiently characterized. This study investigated the Bacteroides eggerthii therapeutic effects on MASLD by integrating multi-omics analysis and experimental validation in a Western diet (WD)-induced mouse model.
Methods
Candidate strains were identified using 16S rRNA gene sequencing of fecal samples from individuals with and without MASLD or obesity. B. eggerthii, a species significantly depleted in both groups, was selected for functional evaluation. Male C57BL/6J mice were fed a WD or WD supplemented with B. eggerthii (WD+B) for 12 weeks. Liver histology, serum biochemistry, fecal microbiome and metabolome profiling, and hepatic and intestinal transcriptomic analyses were performed. Anti-steatotic effects of B. eggerthii–derived metabolites were validated in vitro.
Results
Bacteroides eggerthii supplementation significantly improved liver weight, inflammation, fibrosis, and steatosis in WD+B group compared to WD alone. PICRUSt-based LEfSe analysis revealed choloylglycine hydrolase activity enrichment in gut microbiota, and strain-specific qPCR confirmed colonization in mouse colon. Integrated transcriptomic analyses revealed lipid and bile acid signaling pathway restoration, including CD36, FXR, and FGF15. Untargeted metabolomics identified elevated 2-hydroxyisocaproic acid (HICA) as a strain-derived metabolite in feces and B. eggerthii culture supernatants. In vitro, HICA significantly reduced lipid accumulation in free fatty acid-induced steatosis models.
Conclusions
Bacteroides eggerthii ameliorates MASLD via gut-liver axis modulation, including bile acid metabolism and hepatic lipid signaling. These underscore its therapeutic potential and highlight HICA as a novel microbiome-derived metabolite with anti-steatotic activity.

Citations

Citations to this article as recorded by  Crossref logo
  • Letter to the Editor: Circadian and microbial misalignment in metabolic dysfunction-associated steatotic liver disease - mechanistic insights and chronotherapeutic potential
    Christos Savvidis, Ioannis Ilias
    World Journal of Experimental Medicine.2026;[Epub]     CrossRef
  • Decoding the Gut–Fat–Heart Axis: From Molecular Communication Networks to Clinical Translation Strategies
    Zijin Sun, Wei Shao, Haojia Zhang, Kai Wang, Yongchao Liu, Rui Zhou
    International Journal of Molecular Sciences.2026; 27(12): 5596.     CrossRef
  • 6,911 View
  • 476 Download
  • 5 Web of Science
  • Crossref

Review

Pediatric metabolic dysfunction–associated steatotic liver disease and the gut microbiome: from research landscape to targeted modulation
Lu Jiang, Lan-Duoduo Du, Jing Zeng, Hui-Kuan Chu, Zhong Peng, Jian-Gao Fan
Clin Mol Hepatol 2026;32(1):53-68.
Published online August 19, 2025
DOI: https://doi.org/10.3350/cmh.2025.0718
Metabolic dysfunction–associated steatotic liver disease (MASLD), formerly known as non-alcoholic fatty liver disease, has become the most common form of chronic liver disease in children. The spectrum of pediatric MASLD ranges from simple steatosis to steatohepatitis, fibrosis, cirrhosis, and in rare cases, hepatocellular carcinoma. Its pathogenesis involves a complex interplay among genetic, epigenetic, and environmental factors, along with alterations in the gut microbiota and its associated metabolites. Given the staggering prevalence and the distinct etiopathogenesis of pediatric MASLD, characterization of the gut microbiota and microbial products could facilitate the development of diagnostic tools and inform targeted therapeutic strategies. Current research on the gut microbiome in the context of pediatric MASLD is limited by small sample size, inadequate use of liver biopsy, methodological inconsistencies in sequencing, and confounding effects from metabolic comorbidities. In this review, we summarize clinical studies on alterations in the gut microbiota and microbial products (short-chain fatty acids, bile acids, and ethanol) that impact the pathogenesis of pediatric MASLD. We discuss the therapeutic potential of dietary modification, pharmacological treatments, and probiotics in improving disease progression by summarizing current clinical studies. Enhancing our understanding of the gut-liver axis may aid in the development of effective therapeutic strategies for pediatric MASLD.

Citations

Citations to this article as recorded by  Crossref logo
  • Obesity, Metabolic Syndrome and MASLD in Children: Inflammation as the Missing Link—A Short Narrative Review
    Mihaela-Andreea Podeanu, Claudiu Marinel Ionele, Raluca Elena Sandu, Ion Rogoveanu, Mioara Desdemona Stepan, Carmen Elena Niculescu, Sergiu-Marian Cazacu, Ștefănița Bianca Vintilescu
    Life.2026; 16(2): 310.     CrossRef
  • Artificial intelligence for metabolic dysfunction-associated steatotic liver disease diagnosis: A systematic review
    Ruijuan Wang, Chang Liu, Mei Xue, Jun Qian, Yue Hu
    Computers in Biology and Medicine.2026; 208: 111619.     CrossRef
  • Effects of metabolic syndrome on pulmonary infection in pediatric bronchial asthma: a narrative review
    Li He, Yang Ye
    Frontiers in Pediatrics.2026;[Epub]     CrossRef
  • Microbial metabolites at the nexus of gut-brain communication and neurodevelopmental disorders
    Yupeng Lai, Ming Zhang, Dandan Lang, Enfu Tao
    Frontiers in Nutrition.2026;[Epub]     CrossRef
  • Targeting the Human Gut Microbiota—Between Conventional Therapy and Precision Genetic Engineering
    Naomi-Adina Ciurea, Laura Mahdi, Annarita Graziani, Agostino Di Ciaula, Piero Portincasa, Mohamad Khalil
    Nutrients.2026; 18(12): 1958.     CrossRef
  • Gut Microbiota–Metabolite Alterations Associated with Early Metabolic Dysfunction and Hepatic Steatosis in Adolescents
    Natalia Zeber-Lubecka, Paweł Czarnowski, Joanna Ziemska-Legięcka, Aldona Wierzbicka-Rucińska, Wojciech Jańczyk, Jacek Michałkiewicz, Łukasz Obrycki, Mieczysław Litwin, Michał Mikula, Piotr Socha, Jerzy Ostrowski
    Computational and Structural Biotechnology Journal.2026;[Epub]     CrossRef
  • 10,110 View
  • 341 Download
  • 5 Web of Science
  • Crossref
Original Articles

Steatotic liver disease

Metabolic dysfunction-associated steatotic liver disease exhibits sex-specific microbial heterogeneity within intestinal compartments
Carlos Jose Pirola, Maria Silvina Landa, Mariano Schuman, Silvia Inés García, Adrian Salatino, Silvia Sookoian
Clin Mol Hepatol 2025;31(1):179-195.
Published online October 11, 2024
DOI: https://doi.org/10.3350/cmh.2024.0359
Background/Aims
Evidence suggests that the gastrointestinal microbiome plays a significant role in the biology of metabolic dysfunction-associated steatotic liver disease (MASLD). However, it remains unclear whether disparities in the gut microbiome across intestinal tissular compartments between the sexes lead to MASLD pathogenesis.
Methods
Sex-specific analyses of microbiome composition in two anatomically distinct regions of the gut, the small intestine and colon, were performed using an experimental model of MASLD. The study involved male and female spontaneously hypertensive rats and the Wistar-Kyoto control rat strain, which were fed either a standard chow diet or a high-fat diet for 12 weeks to induce MASLD (12 rats per group). High-throughput 16S sequencing was used for microbiome analysis.
Results
There were significant differences in the overall microbiome composition of male and female rats with MASLD, including variations in topographical gut regions. The beta diversity of the jejunal and colon microbiomes was higher in female rats than in male rats (PERMANOVA p-value=0.001). Sex-specific analysis and discriminant features using LEfSe showed considerable variation in bacterial abundance, along with distinct functional properties, in the jejunum and colon of animals with MASLD. Significantly elevated levels of lipopolysaccharide and protein expression of Toll-like receptor 4 were observed in the livers of male rats with MASLD compared with their female counterparts.
Conclusions
This study uncovered sexual dimorphism in the gut microbiome of MASLD and identified microbial heterogeneity within intestinal compartments. Insights into sex-specific variations in gut microbiome composition could facilitate customised treatment strategies.

Citations

Citations to this article as recorded by  Crossref logo
  • Sex and gender differences in metabolic dysfunction-associated liver disease
    Rishitha Penmetsa, Sasha Kapil, Lisa B. VanWagner
    Indian Journal of Gastroenterology.2026; 45(2): 192.     CrossRef
  • New Definition, New Point of View: Sex and Gender Interpretation of MASLD—Interpretation of Guidelines and Review of the Literature
    Massimo De Luca, Rita Verdoliva, Anna Lombardi, Antonio Giorgio
    Gastroenterology Insights.2026; 17(1): 7.     CrossRef
  • The Gut–Liver Axis in MASLD: From Host–Microbiome Crosstalk to Precision Therapeutics
    Ji Zhou, Bowen Zhu, Ziqian Bing, Tingting Wang, Yue Zhao
    Microorganisms.2026; 14(2): 471.     CrossRef
  • Sex-specific dynamics of MASLD reveal early hepatic and extrahepatic metabolic deterioration in females despite long-term protection
    Maria Repollés-de-Dalmau, Anna Marsal-Beltran, Catalina Núñez-Roa, Joan Vendrell, Victòria Ceperuelo-Mallafré, Sonia Fernández-Veledo
    Biology of Sex Differences.2026;[Epub]     CrossRef
  • Sex-specific cardiometabolic phenotypes in MASLD: 3PM-centric stratification and trajectory mapping for proactive risk assessment
    Carlos José Pirola, Luis Diambra, Tomas Fernández Gianotti, Silvia Sookoian
    EPMA Journal.2026; 17(2): 387.     CrossRef
  • Dysregulation of the Gut-Adipose Tissue-Liver Axis: a Possible Mechanism Behind the Relationship Between Metabolic Dysfunction-Associated Steatotic Liver Disease and Type 2 Diabetes
    Susanna Longo, Tommaso Giovanni Rinaldi, Jose Manuel Fernández-Real, Massimo Federici
    Current Diabetes Reports.2026;[Epub]     CrossRef
  • Correspondence to letter to the editor on “Role of amino acids in the regulation of hepatic gluconeogenesis and lipogenesis in metabolic dysfunctionassociated steatotic liver disease”
    Eiji Kakazu, Masaaki Mino, Tatsuya Kanto
    Clinical and Molecular Hepatology.2026; 32(2): e235.     CrossRef
  • Sex differences in the gut microbiome and related metabolites: role in cardiometabolic disease
    Yi Wang, En Cheng, Brandilyn A. Peters-Samuelson
    Gut Microbes.2026;[Epub]     CrossRef
  • MASLD: Prevalence, Mechanisms, and Sex-Based Therapies in Postmenopausal Women
    Ilaria Milani, Marianna Chinucci, Frida Leonetti, Danila Capoccia
    Biomedicines.2025; 13(4): 855.     CrossRef
  • Characteristics of serum bile acid profiles among individuals with metabolic dysfunction-associated steatotic liver disease
    Sheng Lyu, Jiani Yang, Xin Xin, Qinmei Sun, Beiyu Cai, Xin Wang, Ziming An, Jian Sun, Yiyang Hu, Lei Shi, Qin Feng, Xiaojun Gou
    BMC Gastroenterology.2025;[Epub]     CrossRef
  • Gut-Liver Axis: The Role of Intestinal Microbiota and Their Metabolites in the Progression of Metabolic Dysfunction-Associated Steatotic Liver Disease
    Chao Cui, Shuai Gao, Jingfei Shi, Kai Wang
    Gut and Liver.2025; 19(4): 479.     CrossRef
  • Triglyceride-glucose-waist circumference index: A powerful tool for metabolic dysfunction-associated steatotic liver disease
    Bryan Adrian Priego-Parra, Berenice M Román-Calleja, Rocio Gallego-Duran, Jordi Gracia-Sancho, Jose Antonio Velarde Ruiz-Velasco, Jose Maria Remes-Troche
    World Journal of Hepatology.2025;[Epub]     CrossRef
  • Animal models of lean metabolic dysfunction-associated steatotic liver disease (MASLD): bridging pathogenesis and novel drug discovery
    Stavros P. Papadakos, Chara Georgiadou, Eva Kassi, Rallia-Iliana Velliou, Antonios Chatzigeorgiou
    Expert Opinion on Drug Discovery.2025; 20(12): 1683.     CrossRef
  • 7,802 View
  • 209 Download
  • 13 Web of Science
  • Crossref

Steatotic liver disease

Lactobacillus attenuates progression of nonalcoholic fatty liver disease by lowering cholesterol and steatosis
Na Young Lee, Min Jea Shin, Gi Soo Youn, Sang Jun Yoon, Ye Rin Choi, Hyeong Seop Kim, Haripriya Gupta, Sang Hak Han, Byoung Kook Kim, Do Yup Lee, Tae Sik Park, Hotaik Sung, Byung Yong Kim, Ki Tae Suk
Clin Mol Hepatol 2021;27(1):110-124.
Published online December 3, 2020
DOI: https://doi.org/10.3350/cmh.2020.0125
Background/Aims
Nonalcoholic fatty liver disease (NAFLD) is closely related to gut-microbiome. There is a paucity of research on which strains of gut microbiota affect the progression of NAFLD. This study explored the NAFLD-associated microbiome in humans and the role of Lactobacillus in the progression of NAFLD in mice.
Methods
The gut microbiome was analyzed via next-generation sequencing in healthy people (n=37) and NAFLD patients with elevated liver enzymes (n=57). Six-week-old male C57BL/6J mice were separated into six groups (n=10 per group; normal, Western, and four Western diet + strains [109 colony-forming units/g for 8 weeks; L. acidophilus, L. fermentum, L. paracasei, and L. plantarum]). Liver/body weight ratio, liver pathology, serum analysis, and metagenomics in the mice were examined.
Results
Compared to healthy subjects (1.6±4.3), NAFLD patients showed an elevated Firmicutes/Bacteroidetes ratio (25.0±29.0) and a reduced composition of Akkermansia and L. murinus (P<0.05). In the animal experiment, L. acidophilus group was associated with a significant reduction in liver/body weight ratio (5.5±0.4) compared to the Western group (6.2±0.6) (P<0.05). L. acidophilus (41.0±8.6), L. fermentum (44.3±12.6), and L. plantarum (39.0±7.6) groups showed decreased cholesterol levels compared to the Western group (85.7±8.6) (P<0.05). In comparison of steatosis, L. acidophilus (1.9±0.6), L. plantarum (2.4±0.7), and L. paracasei (2.0±0.9) groups showed significant improvement of steatosis compared to the Western group (2.6±0.5) (P<0.05).
Conclusions
Ingestion of Lactobacillus, such as L. acidophilus, L. fermentum, and L. plantarum, ameliorates the progression of nonalcoholic steatosis by lowering cholesterol. The use of Lactobacillus can be considered as a useful strategy for the treatment of NAFLD.

Citations

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  • Black Sesame Pigment Ameliorates Non-Alcoholic Fatty Liver Disease via Modulation of the Gut–Liver Axis and HIF-1 Signaling Pathway
    Qian Huang, Zhuowen Liang, Qingpeng Li, Ke Wang, Shuang Zhu, Wei Xiao, Lin Zhou
    Antioxidants.2026; 15(2): 177.     CrossRef
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    Umar Pervaiz, Fuxia Wu, Pervaiz Nabeel, Rui Zhao, Zhengbin Zhao, Yibao Zhang, Peng Xia, Pengfei Ji, Xinyi Yuan, Xiaohui Hu, Zhao Guo, Kun Xie, Fang Wang, Degui Wang
    Journal of Oral Microbiology.2026;[Epub]     CrossRef
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    Supriyo Ghosh, Amlan Jyoti Ghosh, Manab Deb Adhikari, Bipransh Kumar Tiwary, Tilak Saha
    Journal of Diabetes & Metabolic Disorders.2026;[Epub]     CrossRef
  • Advances in Cholesterol Regulation by Lactobacillus : Technical Approaches, Mechanisms of Action, and Potential for Clinical Translation
    Jingjing Wang, Yuxin Wang, Yangying Sun, Xiaojiao Zheng, Xiaoqun Zeng, Zhen Wu, Daodong Pan, Maolin Tu
    Food Reviews International.2026; 42(5): 3760.     CrossRef
  • Lactobacillus murinus Alleviates High Fructose‐Induced MASLD by Boosting Arginine Production
    Xinglin Mo, Guilin Zhao, Lanlan Liu, Lan Zhen, Qing Huang, Yue Wang, Xiaopan Yang, Linfei Huang, Luming Wan, Congwen Wei, Ruzhou Zhao, Jie Hu, Yong Li, Jing Yuan, Chenke Ma, Feixiang Wu
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    Annals of Hepatology.2026; 31(1): 102197.     CrossRef
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    Asha Guraka, Sreejesh Sreedharan, Ramesh Arasaradnam, Gyan Tripathi, Ali Kermanizadeh
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    Keyu Chen, Jianbo Wang, Shuang Luo, Yunyun Quan, Ping Wei, Jiali Fu, Jiali Ma, Yuying Yang, Yunten Liu, Zhichong Gao
    Frontiers in Microbiology.2025;[Epub]     CrossRef
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    European Journal of Pharmacology.2025; 1002: 177822.     CrossRef
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    Mehwish Majeed, Waqas Ahmed, Sumera Javad, Iahtisham-Ul-Haq, Summer Rashid, Rashida Perveen, Umar Farooq, Juweria Abid, Abdul Momin Rizwan Ahmad
    Frontiers in Nutrition.2025;[Epub]     CrossRef
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